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Publications
A double-oracle, logic-based Benders decomposition approach to solve the K-adaptability problem
It is critical to measure and mitigate fairness-related harms caused by AI text generation systems, including stereotyping and demeaning har… (voir plus)ms. To that end, we introduce FairPrism, a dataset of 5,000 examples of AI-generated English text with detailed human annotations covering a diverse set of harms relating to gender and sexuality. FairPrism aims to address several limitations of existing datasets for measuring and mitigating fairness-related harms, including improved transparency, clearer specification of dataset coverage, and accounting for annotator disagreement and harms that are context-dependent. FairPrism’s annotations include the extent of stereotyping and demeaning harms, the demographic groups targeted, and appropriateness for different applications. The annotations also include specific harms that occur in interactive contexts and harms that raise normative concerns when the “speaker” is an AI system. Due to its precision and granularity, FairPrism can be used to diagnose (1) the types of fairness-related harms that AI text generation systems cause, and (2) the potential limitations of mitigation methods, both of which we illustrate through case studies. Finally, the process we followed to develop FairPrism offers a recipe for building improved datasets for measuring and mitigating harms caused by AI systems.
2023-07-01
Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers) (publié)
Intrusion detection systems (IDSs) are crucial in the security monitoring for the smart grid with increasing machine-to-machine communicatio… (voir plus)ns and cyber threats thereafter. However, the multi-sourced, correlated, and heterogeneous smart grid data pose significant challenges to the accurate attack detection by IDSs. To improve the attack detection, this paper proposes Reinforcement Learning-based Adaptive Feature Boosting, which aims to leverage a series of AutoEncoders (AEs) to capture critical features from the multi-sourced smart grid data for the classification of normal, fault, and attack events. Multiple AEs are utilized to extract representative features from different feature sets that are automatically generated through a weighted feature sampling process; each AE-extracted feature set is then applied to build a Random Forest (RF) base classifier. In the feature sampling process, Deep Deterministic Policy Gradient (DDPG) is introduced to dynamically determine the feature sampling probability based on the classification accuracy. The critical features that improve the classification accuracy are assigned larger sampling probabilities and increasingly participate in the training of next AE. The presence of critical features is increased in the event classification over the multi-sourced smart grid data. Considering potential different alarms among base classifiers, an ensemble classifier is further built to distinguish normal, fault, and attack events. Our proposed approach is evaluated on the two realistic datasets collected from Hardware-In-the-Loop (HIL) and WUSTIL-IIOT-2021 security testbeds, respectively. The evaluation on the HIL security dataset shows that our proposed approach achieves the classification accuracy with 97.28%, an effective 5.5% increase over the vanilla Adaptive Feature Boosting. Moreover, the proposed approach not only accurately and stably selects critical features on the WUSTIL-IIOT-2021 dataset based on the significant difference of feature sampling probabilities between critical and uncritical features, i.e., the probabilities greater than 0.08 and less than 0.01, but also outperforms the other best-performing approaches with the increasing Matthew Correlation Coefficient (MCC) of 8.03%.
Deep learning-based algorithms have been very successful in skeleton-based human activity recognition. Skeleton data contains 2-D or 3-D coo… (voir plus)rdinates of human body joints. The main focus of most of the existing skeleton-based activity recognition methods is on designing new deep architectures to learn discriminative features, where all body joints are considered equally important in recognition. However, the importance of joints varies as an activity proceeds within a video and across different activities. In this work, we hypothesize that selecting relevant joints, prior to recognition, can enhance performance of the existing deep learning-based recognition models. We propose a spatial hard attention finding method that aims to remove the uninformative and/or misleading joints at each frame. We formulate the joint selection problem as a Markov decision process and employ deep reinforcement learning to train the proposed spatial-attention-aware agent. No extra labels are needed for the agent’s training. The agent takes a sequence of features extracted from skeleton video as input and outputs a sequence of probabilities for joints. The proposed method can be considered as a general framework that can be integrated with the existing skeleton-based activity recognition methods for performance improvement purposes. We obtain very competitive activity recognition results on three commonly used human activity recognition datasets.
2023-07-01
IEEE Transactions on Systems, Man, and Cybernetics: Systems (publié)
Abstract Motivation Accurately assessing contacts between DNA fragments inside the nucleus with Hi-C experiment is crucial for understanding… (voir plus) the role of 3D genome organization in gene regulation. This challenging task is due in part to the high sequencing depth of Hi-C libraries required to support high-resolution analyses. Most existing Hi-C data are collected with limited sequencing coverage, leading to poor chromatin interaction frequency estimation. Current computational approaches to enhance Hi-C signals focus on the analysis of individual Hi-C datasets of interest, without taking advantage of the facts that (i) several hundred Hi-C contact maps are publicly available and (ii) the vast majority of local spatial organizations are conserved across multiple cell types. Results Here, we present RefHiC-SR, an attention-based deep learning framework that uses a reference panel of Hi-C datasets to facilitate the enhancement of Hi-C data resolution of a given study sample. We compare RefHiC-SR against tools that do not use reference samples and find that RefHiC-SR outperforms other programs across different cell types, and sequencing depths. It also enables high-accuracy mapping of structures such as loops and topologically associating domains. Availability and implementation https://github.com/BlanchetteLab/RefHiC.
Disentanglement aims to recover meaningful latent ground-truth factors from the observed distribution solely, and is formalized through the … (voir plus)theory of identifiability. The identifiability of independent latent factors is proven to be impossible in the unsupervised i.i.d. setting under a general nonlinear map from factors to observations. In this work, however, we demonstrate that it is possible to recover quantized latent factors under a generic nonlinear diffeomorphism. We only assume that the latent factors have independent discontinuities in their density, without requiring the factors to be statistically independent. We introduce this novel form of identifiability, termed quantized factor identifiability, and provide a comprehensive proof of the recovery of the quantized factors.
Genomic (DNA) sequences encode an enormous amount of information for gene regulation and protein synthesis. Similar to natural language mode… (voir plus)ls, researchers have proposed foundation models in genomics to learn generalizable features from unlabeled genome data that can then be fine-tuned for downstream tasks such as identifying regulatory elements. Due to the quadratic scaling of attention, previous Transformer-based genomic models have used 512 to 4k tokens as context (0.001% of the human genome), significantly limiting the modeling of long-range interactions in DNA. In addition, these methods rely on toke
