Publications

Leveraging Data Characteristics for Bug Localization in Deep Learning Programs

Ruchira Manke

Mohammad Wardat

Foutse Khomh

Hridesh Rajan

Deep Learning (DL) is a class of machine learning algorithms that are used in a wide variety of applications. Like any software system, DL p… (voir plus)rograms can have bugs. To support bug localization in DL programs, several tools have been proposed in the past. As most of the bugs that occur due to improper model structure known as structural bugs lead to inadequate performance during training, it is challenging for developers to identify the root cause and address these bugs. To support bug detection and localization in DL programs, in this paper, we propose Theia, which detects and localizes structural bugs in DL programs. Unlike the previous works, Theia considers the training dataset characteristics to automatically detect bugs in DL programs developed using two deep learning libraries, Keras and PyTorch . Since training the DL models is a time-consuming process, Theia detects these bugs at the beginning of the training process and alerts the developer with informative messages containing the bug's location and actionable fixes which will help them to improve the structure of the model. We evaluated Theia on a benchmark of 40 real-world buggy DL programs obtained from Stack Overflow . Our results show that Theia successfully localizes 57/75 structural bugs in 40 buggy programs, whereas NeuraLint, a state-of-the-art approach capable of localizing structural bugs before training localizes 17/75 bugs.

2024-12-08

ArXiv (prépublication)

The Responsible Foundation Model Development Cheatsheet: A Review of Tools&Resources

Shayne Longpre

Stella Biderman

Alon Albalak

Hailey Schoelkopf

Daniel McDuff

Sayash Kapoor

Kevin Klyman

Kyle Lo

Gabriel Ilharco

Nay San

Maribeth Rauh

Aviya Skowron

Bertie Vidgen

Laura Weidinger

Arvind Narayanan

Victor Sanh

David Ifeoluwa Adelani

Percy Liang

Rishi Bommasani

Peter Henderson … (voir 3 de plus)

Sasha Luccioni

Yacine Jernite

Luca Soldaini

2024-12-07

TMLR (accepté)

openreview.net

The BrowserGym Ecosystem for Web Agent Research

Thibault Le Sellier de Chezelles

Maxime Gasse

Alexandre Lacoste

Alexandre Drouin

Massimo Caccia

Léo Boisvert

Megh Thakkar

Tom Marty

Rim Assouel

Sahar Omidi Shayegan

Lawrence Jang

Xing Han Lu

Ori Yoran

Dehan Kong

Frank F. Xu

Siva Reddy

Quentin Cappart

Graham Neubig

Ruslan Salakhutdinov

The BrowserGym ecosystem addresses the growing need for efficient evaluation and benchmarking of web agents, particularly those leveraging a… (voir plus)utomation and Large Language Models (LLMs) for web interaction tasks. Many existing benchmarks suffer from fragmentation and inconsistent evaluation methodologies, making it challenging to achieve reliable comparisons and reproducible results. BrowserGym aims to solve this by providing a unified, gym-like environment with well-defined observation and action spaces, facilitating standardized evaluation across diverse benchmarks. Combined with AgentLab, a complementary framework that aids in agent creation, testing, and analysis, BrowserGym offers flexibility for integrating new benchmarks while ensuring consistent evaluation and comprehensive experiment management. This standardized approach seeks to reduce the time and complexity of developing web agents, supporting more reliable comparisons and facilitating in-depth analysis of agent behaviors, and could result in more adaptable, capable agents, ultimately accelerating innovation in LLM-driven automation. As a supporting evidence, we conduct the first large-scale, multi-benchmark web agent experiment and compare the performance of 6 state-of-the-art LLMs across all benchmarks currently available in BrowserGym. Among other findings, our results highlight a large discrepancy between OpenAI and Anthropic's latests models, with Claude-3.5-Sonnet leading the way on almost all benchmarks, except on vision-related tasks where GPT-4o is superior. Despite these advancements, our results emphasize that building robust and efficient web agents remains a significant challenge, due to the inherent complexity of real-world web environments and the limitations of current models.

2024-12-06

ArXiv (prépublication)

The BrowserGym Ecosystem for Web Agent Research

Thibault Le Sellier de Chezelles

Maxime Gasse

Alexandre Lacoste

Alexandre Drouin

Massimo Caccia

Léo Boisvert

Megh Thakkar

Tom Marty

Rim Assouel

Sahar Omidi Shayegan

Lawrence Jang

Xing Han Lu

Ori Yoran

Dehan Kong

Frank F. Xu

Siva Reddy

Quentin Cappart

Graham Neubig

Ruslan Salakhutdinov

The BrowserGym ecosystem addresses the growing need for efficient evaluation and benchmarking of web agents, particularly those leveraging a… (voir plus)utomation and Large Language Models (LLMs) for web interaction tasks. Many existing benchmarks suffer from fragmentation and inconsistent evaluation methodologies, making it challenging to achieve reliable comparisons and reproducible results. BrowserGym aims to solve this by providing a unified, gym-like environment with well-defined observation and action spaces, facilitating standardized evaluation across diverse benchmarks. Combined with AgentLab, a complementary framework that aids in agent creation, testing, and analysis, BrowserGym offers flexibility for integrating new benchmarks while ensuring consistent evaluation and comprehensive experiment management. This standardized approach seeks to reduce the time and complexity of developing web agents, supporting more reliable comparisons and facilitating in-depth analysis of agent behaviors, and could result in more adaptable, capable agents, ultimately accelerating innovation in LLM-driven automation. As a supporting evidence, we conduct the first large-scale, multi-benchmark web agent experiment and compare the performance of 6 state-of-the-art LLMs across all benchmarks currently available in BrowserGym. Among other findings, our results highlight a large discrepancy between OpenAI and Anthropic's latests models, with Claude-3.5-Sonnet leading the way on almost all benchmarks, except on vision-related tasks where GPT-4o is superior. Despite these advancements, our results emphasize that building robust and efficient web agents remains a significant challenge, due to the inherent complexity of real-world web environments and the limitations of current models.

2024-12-06

ArXiv (prépublication)

The BrowserGym Ecosystem for Web Agent Research

Thibault Le Sellier de Chezelles

Maxime Gasse

Alexandre Lacoste

Alexandre Drouin

Massimo Caccia

Léo Boisvert

Megh Thakkar

Tom Marty

Rim Assouel

Sahar Omidi Shayegan

Lawrence Jang

Xing Han Lu

Ori Yoran

Dehan Kong

Frank F. Xu

Siva Reddy

Quentin Cappart

Graham Neubig

Ruslan Salakhutdinov

The BrowserGym ecosystem addresses the growing need for efficient evaluation and benchmarking of web agents, particularly those leveraging a… (voir plus)utomation and Large Language Models (LLMs) for web interaction tasks. Many existing benchmarks suffer from fragmentation and inconsistent evaluation methodologies, making it challenging to achieve reliable comparisons and reproducible results. BrowserGym aims to solve this by providing a unified, gym-like environment with well-defined observation and action spaces, facilitating standardized evaluation across diverse benchmarks. Combined with AgentLab, a complementary framework that aids in agent creation, testing, and analysis, BrowserGym offers flexibility for integrating new benchmarks while ensuring consistent evaluation and comprehensive experiment management. This standardized approach seeks to reduce the time and complexity of developing web agents, supporting more reliable comparisons and facilitating in-depth analysis of agent behaviors, and could result in more adaptable, capable agents, ultimately accelerating innovation in LLM-driven automation. As a supporting evidence, we conduct the first large-scale, multi-benchmark web agent experiment and compare the performance of 6 state-of-the-art LLMs across all benchmarks currently available in BrowserGym. Among other findings, our results highlight a large discrepancy between OpenAI and Anthropic's latests models, with Claude-3.5-Sonnet leading the way on almost all benchmarks, except on vision-related tasks where GPT-4o is superior. Despite these advancements, our results emphasize that building robust and efficient web agents remains a significant challenge, due to the inherent complexity of real-world web environments and the limitations of current models.

2024-12-06

ArXiv (prépublication)

Turncoat antibodies unmasked in a model of autoimmune demyelination: from biology to therapy

Reza Taghipour-Mirakmahaleh

Françoise Morin

Yu Zhang

Louis Bourhoven

Louis-Charles Béland

Qun Zhou

Julie Jaworski

Anna Park

Juan Manuel Dominguez

Jacques Corbeil

Eoin P Flanagan

Romain Marignier

Catherine Larochelle

Steven Kerfoot

Luc Vallières

Autoantibodies contribute to many autoimmune diseases, yet there is no approved therapy to neutralize them selectively. A popular mouse mode… (voir plus)l, experimental autoimmune encephalomyelitis (EAE), could serve to develop such a therapy, provided we can better understand the nature and importance of the autoantibodies involved. Here we report the discovery of autoantibody-secreting extrafollicular plasmablasts in EAE induced with specific myelin oligodendrocyte glycoprotein (MOG) antigens. Single-cell RNA sequencing reveals that these cells produce non-affinity-matured IgG antibodies. These include pathogenic antibodies competing for shared binding space on MOG’s extracellular domain. Interestingly, the synthetic anti-MOG antibody 8-18C5 can prevent the binding of pathogenic antibodies from either EAE mice or people with MOG antibody disease (MOGAD). Moreover, an 8-18C5 variant carrying the NNAS mutation, which inactivates its effector functions, can reduce EAE severity and promote functional recovery. In brief, this study provides not only a comprehensive characterization of the humoral response in EAE models, but also a proof of concept for a novel therapy to antagonize pathogenic anti-MOG antibodies.

2024-12-06

bioRxiv (prépublication)

Assessing and Learning Alignment of Unimodal Vision and Language Models

Le Zhang

Qian Yang

Aishwarya Agrawal

How well are unimodal vision and language models aligned? Although prior work have approached answering this question, their assessment meth… (voir plus)ods do not directly translate to how these models are used in practical vision-language tasks. In this paper, we propose a direct assessment method, inspired by linear probing, to assess vision-language alignment. We identify that the degree of alignment of the SSL vision models depends on their SSL training objective, and we find that the clustering quality of SSL representations has a stronger impact on alignment performance than their linear separability. Next, we introduce Swift Alignment of Image and Language (SAIL), a efficient transfer learning framework that aligns pretrained unimodal vision and language models for downstream vision-language tasks. Since SAIL leverages the strengths of pretrained unimodal models, it requires significantly fewer (6%) paired image-text data for the multimodal alignment compared to models like CLIP which are trained from scratch. SAIL training only requires a single A100 GPU, 5 hours of training and can accommodate a batch size up to 32,768. SAIL achieves 73.4% zero-shot accuracy on ImageNet (vs. CLIP's 72.7%) and excels in zero-shot retrieval, complex reasoning, and semantic segmentation. Additionally, SAIL improves the language-compatibility of vision encoders that in turn enhance the performance of multimodal large language models. The entire codebase and model weights are open-source: https://lezhang7.github.io/sail.github.io/

2024-12-05

ArXiv (prépublication)

Assessing and Learning Alignment of Unimodal Vision and Language Models

Le Zhang

Qian Yang

Aishwarya Agrawal

How well are unimodal vision and language models aligned? Although prior work have approached answering this question, their assessment meth… (voir plus)ods do not directly translate to how these models are used in practical vision-language tasks. In this paper, we propose a direct assessment method, inspired by linear probing, to assess vision-language alignment. We identify that the degree of alignment of the SSL vision models depends on their SSL training objective, and we find that the clustering quality of SSL representations has a stronger impact on alignment performance than their linear separability. Next, we introduce Swift Alignment of Image and Language (SAIL), a efficient transfer learning framework that aligns pretrained unimodal vision and language models for downstream vision-language tasks. Since SAIL leverages the strengths of pretrained unimodal models, it requires significantly fewer (6%) paired image-text data for the multimodal alignment compared to models like CLIP which are trained from scratch. SAIL training only requires a single A100 GPU, 5 hours of training and can accommodate a batch size up to 32,768. SAIL achieves 73.4% zero-shot accuracy on ImageNet (vs. CLIP's 72.7%) and excels in zero-shot retrieval, complex reasoning, and semantic segmentation. Additionally, SAIL improves the language-compatibility of vision encoders that in turn enhance the performance of multimodal large language models. The entire codebase and model weights are open-source: https://lezhang7.github.io/sail.github.io/

2024-12-05

ArXiv (prépublication)

Assessing and Learning Alignment of Unimodal Vision and Language Models

Le Zhang

Qian Yang

Aishwarya Agrawal

How well are unimodal vision and language models aligned? Although prior work have approached answering this question, their assessment meth… (voir plus)ods do not directly translate to how these models are used in practical vision-language tasks. In this paper, we propose a direct assessment method, inspired by linear probing, to assess vision-language alignment. We identify that the degree of alignment of the SSL vision models depends on their SSL training objective, and we find that the clustering quality of SSL representations has a stronger impact on alignment performance than their linear separability. Next, we introduce Swift Alignment of Image and Language (SAIL), a efficient transfer learning framework that aligns pretrained unimodal vision and language models for downstream vision-language tasks. Since SAIL leverages the strengths of pretrained unimodal models, it requires significantly fewer (6%) paired image-text data for the multimodal alignment compared to models like CLIP which are trained from scratch. SAIL training only requires a single A100 GPU, 5 hours of training and can accommodate a batch size up to 32,768. SAIL achieves 73.4% zero-shot accuracy on ImageNet (vs. CLIP's 72.7%) and excels in zero-shot retrieval, complex reasoning, and semantic segmentation. Additionally, SAIL improves the language-compatibility of vision encoders that in turn enhance the performance of multimodal large language models. The entire codebase and model weights are open-source: https://lezhang7.github.io/sail.github.io/

2024-12-05

ArXiv (prépublication)

BigDocs: An Open and Permissively-Licensed Dataset for Training Multimodal Models on Document and Code Tasks

Juan Rodriguez

Xiangru Jian

Siba Smarak Panigrahi

Tianyu Zhang

Aarash Feizi

Abhay Puri

Akshay Kalkunte

Franccois Savard

Ahmed Masry

Shravan Nayak

Rabiul Awal

Mahsa Massoud

Amirhossein Abaskohi

Zichao Li

Suyuchen Wang

Pierre-Andre Noel

M. L. Richter

Saverio Vadacchino

Shubbam Agarwal

Sanket Biswas … (voir 23 de plus)

Sara Shanian

Ying Zhang

Noah Bolger

Kurt MacDonald

Simon Fauvel

Sathwik Tejaswi

Srinivas Sunkara

Joao Monteiro

Krishnamurthy Dj Dvijotham

Torsten Scholak

Sepideh Kharagani

Sean Hughes

M. Özsu

Issam Hadj Laradji

Spandanna Gella

Perouz Taslakian

David Vazquez

Sai Rajeswar

Multimodal AI has the potential to significantly enhance document-understanding tasks, such as processing receipts, understanding workflows,… (voir plus) extracting data from documents, and summarizing reports. Code generation tasks that require long-structured outputs can also be enhanced by multimodality. Despite this, their use in commercial applications is often limited due to limited access to training data and restrictive licensing, which hinders open access. To address these limitations, we introduce BigDocs-7.5M, a high-quality, open-access dataset comprising 7.5 million multimodal documents across 30 tasks. We use an efficient data curation process to ensure our data is high-quality and license-permissive. Our process emphasizes accountability, responsibility, and transparency through filtering rules, traceable metadata, and careful content analysis. Additionally, we introduce BigDocs-Bench, a benchmark suite with 10 novel tasks where we create datasets that reflect real-world use cases involving reasoning over Graphical User Interfaces (GUI) and code generation from images. Our experiments show that training with BigDocs-Bench improves average performance up to 25.8% over closed-source GPT-4o in document reasoning and structured output tasks such as Screenshot2HTML or Image2Latex generation. Finally, human evaluations showed a preference for outputs from models trained on BigDocs over GPT-4o. This suggests that BigDocs can help both academics and the open-source community utilize and improve AI tools to enhance multimodal capabilities and document reasoning. The project is hosted at https://bigdocs.github.io .

2024-12-05

ArXiv (prépublication)

BigDocs: An Open and Permissively-Licensed Dataset for Training Multimodal Models on Document and Code Tasks

Juan Rodriguez

Xiangru Jian

Siba Smarak Panigrahi

Tianyu Zhang

Aarash Feizi

Abhay Puri

Akshay Kalkunte

Franccois Savard

Ahmed Masry

Shravan Nayak

Rabiul Awal

Mahsa Massoud

Amirhossein Abaskohi

Zichao Li

Suyuchen Wang

Pierre-Andre Noel

Mats Leon Richter

Saverio Vadacchino

Shubbam Agarwal

Sanket Biswas … (voir 23 de plus)

Sara Shanian

Ying Zhang

Noah Bolger

Kurt MacDonald

Simon Fauvel

Sathwik Tejaswi

Srinivas Sunkara

Joao Monteiro

Krishnamurthy Dj Dvijotham

Torsten Scholak

Sepideh Kharaghani

Sean Hughes

M. Özsu

Issam Hadj Laradji

Spandanna Gella

Perouz Taslakian

David Vazquez

Sai Rajeswar

Multimodal AI has the potential to significantly enhance document-understanding tasks, such as processing receipts, understanding workflows,… (voir plus) extracting data from documents, and summarizing reports. Code generation tasks that require long-structured outputs can also be enhanced by multimodality. Despite this, their use in commercial applications is often limited due to limited access to training data and restrictive licensing, which hinders open access. To address these limitations, we introduce BigDocs-7.5M, a high-quality, open-access dataset comprising 7.5 million multimodal documents across 30 tasks. We use an efficient data curation process to ensure our data is high-quality and license-permissive. Our process emphasizes accountability, responsibility, and transparency through filtering rules, traceable metadata, and careful content analysis. Additionally, we introduce BigDocs-Bench, a benchmark suite with 10 novel tasks where we create datasets that reflect real-world use cases involving reasoning over Graphical User Interfaces (GUI) and code generation from images. Our experiments show that training with BigDocs-Bench improves average performance up to 25.8% over closed-source GPT-4o in document reasoning and structured output tasks such as Screenshot2HTML or Image2Latex generation. Finally, human evaluations showed a preference for outputs from models trained on BigDocs over GPT-4o. This suggests that BigDocs can help both academics and the open-source community utilize and improve AI tools to enhance multimodal capabilities and document reasoning. The project is hosted at https://bigdocs.github.io .

2024-12-05

ArXiv (prépublication)