Publications

Self-Consuming Generative Models with Curated Data Provably Optimize Human Preferences
The rapid progress in generative models has resulted in impressive leaps in generation quality, blurring the lines between synthetic and rea… (voir plus)l data. Web-scale datasets are now prone to the inevitable contamination by synthetic data, directly impacting the training of future generated models. Already, some theoretical results on self-consuming generative models (a.k.a., iterative retraining) have emerged in the literature, showcasing that either model collapse or stability could be possible depending on the fraction of generated data used at each retraining step. However, in practice, synthetic data is often subject to human feedback and curated by users before being used and uploaded online. For instance, many interfaces of popular text-to-image generative models, such as Stable Diffusion or Midjourney, produce several variations of an image for a given query which can eventually be curated by the users. In this paper, we theoretically study the impact of data curation on iterated retraining of generative models and show that it can be seen as an \emph{implicit preference optimization mechanism}. However, unlike standard preference optimization, the generative model does not have access to the reward function or negative samples needed for pairwise comparisons. Moreover, our study doesn't require access to the density function, only to samples. We prove that, if the data is curated according to a reward model, then the expected reward of the iterative retraining procedure is maximized. We further provide theoretical results on the stability of the retraining loop when using a positive fraction of real data at each step. Finally, we conduct illustrative experiments on both synthetic datasets and on CIFAR10 showing that such a procedure amplifies biases of the reward model.
Sequence-Augmented SE(3)-Flow Matching For Conditional Protein Backbone Generation
Simplifying Constraint Inference with Inverse Reinforcement Learning
Adriana Hugessen
Learning safe policies has presented a longstanding challenge for the reinforcement learning (RL) community. Various formulations of safe RL… (voir plus) have been proposed; However, fundamentally, tabula rasa RL must learn safety constraints through experience, which is problematic for real-world applications. Imitation learning is often preferred in real-world settings because the experts’ safety preferences are embedded in the data the agent imitates. However, imitation learning is limited in its extensibility to new tasks, which can only be learned by providing the agent with expert trajectories. For safety-critical applications with sub-optimal or inexact expert data, it would be preferable to learn only the safety aspects of the policy through imitation, while still allowing for task learning with RL. The field of inverse constrained RL, which seeks to infer constraints from expert data, is a promising step in this direction. However, prior work in this area has relied on complex tri-level optimizations in order to infer safe behavior (constraints). This challenging optimization landscape leads to sub-optimal performance on several benchmark tasks. In this work, we present a simplified version of constraint inference that performs as well or better than prior work across a collection of continuous-control benchmarks. Moreover, besides improving performance, this simplified framework is easier to implement, tune, and more readily lends itself to various extensions, such as offline constraint inference. Our code is made available at https://github.com/ahugs/simple-icrl.
Soft Prompt Threats: Attacking Safety Alignment and Unlearning in Open-Source LLMs through the Embedding Space
Current research in adversarial robustness of LLMs focuses on discrete input manipulations in the natural language space, which can be direc… (voir plus)tly transferred to closed-source models. However, this approach neglects the steady progression of open-source models. As open-source models advance in capability, ensuring their safety also becomes increasingly imperative. Yet, attacks tailored to open-source LLMs that exploit full model access remain largely unexplored. We address this research gap and propose the embedding space attack, which directly attacks the continuous embedding representation of input tokens. We find that embedding space attacks circumvent model alignments and trigger harmful behaviors more efficiently than discrete attacks or model fine-tuning. Furthermore, we present a novel threat model in the context of unlearning and show that embedding space attacks can extract supposedly deleted information from unlearned LLMs across multiple datasets and models. Our findings highlight embedding space attacks as an important threat model in open-source LLMs. Trigger Warning: the appendix contains LLM-generated text with violence and harassment.
TapeAgents: a Holistic Framework for Agent Development and Optimization
Nicolas Gontier
Ehsan Kamalloo
Rafael Pardinas
Torsten Scholak
Oleh Shliazhko
Jordan Prince Tremblay
Soham Parikh
Mitul Tiwari
Quaizar Vohra
We present TapeAgents, an agent framework built around a granular, structured log tape of the agent session that also plays the role of the … (voir plus)session's resumable state. In TapeAgents we leverage tapes to facilitate all stages of the LLM Agent development lifecycle. The agent reasons by processing the tape and the LLM output to produce new thought and action steps and append them to the tape. The environment then reacts to the agent's actions by likewise appending observation steps to the tape. By virtue of this tape-centred design, TapeAgents can provide AI practitioners with holistic end-to-end support. At the development stage, tapes facilitate session persistence, agent auditing, and step-by-step debugging. Post-deployment, one can reuse tapes for evaluation, fine-tuning, and prompt-tuning; crucially, one can adapt tapes from other agents or use revised historical tapes. In this report, we explain the TapeAgents design in detail. We demonstrate possible applications of TapeAgents with several concrete examples of building monolithic agents and multi-agent teams, of optimizing agent prompts and finetuning the agent's LLM. We present tooling prototypes and report a case study where we use TapeAgents to finetune a Llama-3.1-8B form-filling assistant to perform as well as GPT-4o while being orders of magnitude cheaper. Lastly, our comparative analysis shows that TapeAgents's advantages over prior frameworks stem from our novel design of the LLM agent as a resumable, modular state machine with a structured configuration, that generates granular, structured logs and that can transform these logs into training text -- a unique combination of features absent in previous work.
TGB 2.0: A Benchmark for Learning on Temporal Knowledge Graphs and Heterogeneous Graphs
Multi-relational temporal graphs are powerful tools for modeling real-world data, capturing the evolving and interconnected nature of entiti… (voir plus)es over time. Recently, many novel models are proposed for ML on such graphs intensifying the need for robust evaluation and standardized benchmark datasets. However, the availability of such resources remains scarce and evaluation faces added complexity due to reproducibility issues in experimental protocols. To address these challenges, we introduce Temporal Graph Benchmark 2.0 (TGB 2.0), a novel benchmarking framework tailored for evaluating methods for predicting future links on Temporal Knowledge Graphs and Temporal Heterogeneous Graphs with a focus on large-scale datasets, extending the Temporal Graph Benchmark. TGB 2.0 facilitates comprehensive evaluations by presenting eight novel datasets spanning five domains with up to 53 million edges. TGB 2.0 datasets are significantly larger than existing datasets in terms of number of nodes, edges, or timestamps. In addition, TGB 2.0 provides a reproducible and realistic evaluation pipeline for multi-relational temporal graphs. Through extensive experimentation, we observe that 1) leveraging edge-type information is crucial to obtain high performance, 2) simple heuristic baselines are often competitive with more complex methods, 3) most methods fail to run on our largest datasets, highlighting the need for research on more scalable methods.
The High Line: Exact Risk and Learning Rate Curves of Stochastic Adaptive Learning Rate Algorithms
We develop a framework for analyzing the training and learning rate dynamics on a large class of high-dimensional optimization problems, whi… (voir plus)ch we call the high line, trained using one-pass stochastic gradient descent (SGD) with adaptive learning rates. We give exact expressions for the risk and learning rate curves in terms of a deterministic solution to a system of ODEs. We then investigate in detail two adaptive learning rates -- an idealized exact line search and AdaGrad-Norm -- on the least squares problem. When the data covariance matrix has strictly positive eigenvalues, this idealized exact line search strategy can exhibit arbitrarily slower convergence when compared to the optimal fixed learning rate with SGD. Moreover we exactly characterize the limiting learning rate (as time goes to infinity) for line search in the setting where the data covariance has only two distinct eigenvalues. For noiseless targets, we further demonstrate that the AdaGrad-Norm learning rate converges to a deterministic constant inversely proportional to the average eigenvalue of the data covariance matrix, and identify a phase transition when the covariance density of eigenvalues follows a power law distribution. We provide our code for evaluation at https://github.com/amackenzie1/highline2024.
On the Scalability of Certified Adversarial Robustness with Generated Data
Thomas Altstidl
Arthur Kosmala
Björn Eskofier
Certified defenses against adversarial attacks offer formal guarantees on the robustness of a model, making them more reliable than empirica… (voir plus)l methods such as adversarial training, whose effectiveness is often later reduced by unseen attacks. Still, the limited certified robustness that is currently achievable has been a bottleneck for their practical adoption. Gowal et al. and Wang et al. have shown that generating additional training data using state-of-the-art diffusion models can considerably improve the robustness of adversarial training. In this work, we demonstrate that a similar approach can substantially improve deterministic certified defenses but also reveal notable differences in the scaling behavior between certified and empirical methods. In addition, we provide a list of recommendations to scale the robustness of certified training approaches. Our approach achieves state-of-the-art deterministic robustness certificates on CIFAR-10 for the ℓ 2 ( ϵ = 36 / 255 ) and ℓ ∞ ( ϵ = 8 / 255 ) threat models, outperforming the previous results by +3 . 95 and +1 . 39 percentage points, respectively. Furthermore, we report similar improvements for CIFAR-100.
On the Scalability of GNNs for Molecular Graphs
Maciej Sypetkowski
Nia Dickson
Karush Suri
Philip Fradkin
Scaling deep learning models has been at the heart of recent revolutions in language modelling and image generation. Practitioners have obse… (voir plus)rved a strong relationship between model size, dataset size, and performance. However, structure-based architectures such as Graph Neural Networks (GNNs) are yet to show the benefits of scale mainly due to the lower efficiency of sparse operations, large data requirements, and lack of clarity about the effectiveness of various architectures. We address this drawback of GNNs by studying their scaling behavior. Specifically, we analyze message-passing networks, graph Transformers, and hybrid architectures on the largest public collection of 2D molecular graphs. For the first time, we observe that GNNs benefit tremendously from the increasing scale of depth, width, number of molecules, number of labels, and the diversity in the pretraining datasets, resulting in a 30.25% improvement when scaling to 1 billion parameters and 28.98% improvement when increasing size of dataset to eightfold. We further demonstrate strong finetuning scaling behavior on 38 tasks, outclassing previous large models. We hope that our work paves the way for an era where foundational GNNs drive pharmaceutical drug discovery.
Towards a “universal translator” for neural dynamics at single-cell, single-spike resolution
Yizi Zhang
Yanchen Wang
Donato M. Jiménez-Benetó
Zixuan Wang
Mehdi Azabou
Renee Tung
Olivier Winter
The International Brain Laboratory
Eva Dyer
Liam Paninski
Cole Hurwitz
Neuroscience research has made immense progress over the last decade, but our understanding of the brain remains fragmented and piecemeal: t… (voir plus)he dream of probing an arbitrary brain region and automatically reading out the information encoded in its neural activity remains out of reach. In this work, we build towards a first foundation model for neural spiking data that can solve a diverse set of tasks across multiple brain areas. We introduce a novel self-supervised modeling approach for population activity in which the model alternates between masking out and reconstructing neural activity across different time steps, neurons, and brain regions. To evaluate our approach, we design unsupervised and supervised prediction tasks using the International Brain Laboratory repeated site dataset, which is comprised of Neuropixels recordings targeting the same brain locations across 48 animals and experimental sessions. The prediction tasks include single-neuron and region-level activity prediction, forward prediction, and behavior decoding. We demonstrate that our multi-task-masking (MtM) approach significantly improves the performance of current state-of-the-art population models and enables multi-task learning. We also show that by training on multiple animals, we can improve the generalization ability of the model to unseen animals, paving the way for a foundation model of the brain at single-cell, single-spike resolution.
Trajectory Flow Matching with Applications to Clinical Time Series Modeling
Xi Zhang
Yuan Pu
Yuki Kawamura
Andrew Loza
Dennis L. Shung
VisMin: Visual Minimal-Change Understanding
Fine-grained understanding of objects, attributes, and relationships between objects is crucial for visual-language models (VLMs). Existing … (voir plus)benchmarks primarily focus on evaluating VLMs' capability to distinguish between two very similar captions given an image. In this paper, we introduce a new, challenging benchmark termed Visual Minimal-Change Understanding (VisMin), which requires models to predict the correct image-caption match given two images and two captions. The image pair and caption pair contain minimal changes, i.e., only one aspect changes at a time from among the following: object, attribute, count, and spatial relation. These changes test the models' understanding of objects, attributes (such as color, material, shape), counts, and spatial relationships between objects. We built an automatic framework using large language models and diffusion models, followed by a rigorous 4-step verification process by human annotators. Empirical experiments reveal that current VLMs exhibit notable deficiencies in understanding spatial relationships and counting abilities. We also generate a large-scale training dataset to finetune CLIP and Idefics2, showing significant improvements in fine-grained understanding across benchmarks and in CLIP's general image-text alignment. We release all resources, including the benchmark, training data, and finetuned model checkpoints, at https://vismin.net/.