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Publications
Towards Machines that Trust: AI Agents Learn to Trust in the Trust Game
Widely considered a cornerstone of human morality, trust shapes many aspects of human social interactions. In this work, we present a theore… (voir plus)tical analysis of the
Recently, machine and deep learning (ML/DL) algorithms have been increasingly adopted in many software systems. Due to their inductive natur… (voir plus)e, ensuring the quality of these systems remains a significant challenge for the research community. Unlike traditional software built deductively by writing explicit rules, ML/DL systems infer rules from training data. Recent research in ML/DL quality assurance has adapted concepts from traditional software testing, such as mutation testing, to improve reliability. However, it is unclear if these proposed testing techniques are adopted in practice, or if new testing strategies have emerged from real-world ML deployments. There is little empirical evidence about the testing strategies.
To fill this gap, we perform the first fine-grained empirical study on ML testing in the wild to identify the ML properties being tested, the testing strategies, and their implementation throughout the ML workflow.
We conducted a mixed-methods study to understand ML software testing practices. We analyzed test files and cases from 11 open-source ML/DL projects on GitHub. Using open coding, we manually examined the testing strategies, tested ML properties, and implemented testing methods to understand their practical application in building and releasing ML/DL software systems.
Our findings reveal several key insights: 1.) The most common testing strategies, accounting for less than 40%, are Grey-box and White-box methods, such as Negative Testing, Oracle Approximation and Statistical Testing. 2.) A wide range of 17 ML properties are tested, out of which only 20% to 30% are frequently tested, including Consistency, Correctness}, and Efficiency. 3.) Bias and Fairness is more tested in Recommendation, while Security & Privacy is tested in Computer Vision (CV) systems, Application Platforms, and Natural Language Processing (NLP) systems.
Moiré superlattices have emerged as an exciting condensed-matter quantum simulator for exploring the exotic physics of strong electronic co… (voir plus)rrelations. Notable progress has been witnessed, but such correlated states are achievable usually at low temperatures. Here, we report evidence of possible room-temperature correlated electronic states and layer-hybridized SU(4) model simulator in AB-stacked MoS_{2} homobilayer moiré superlattices. Correlated insulating states at moiré band filling factors v=1, 2, 3 are unambiguously established in twisted bilayer MoS_{2}. Remarkably, the correlated electronic state at v=1 shows a giant correlated gap of ∼126 meV and may persist up to a record-high critical temperature over 285 K. The realization of a possible room-temperature correlated state with a large correlated gap in twisted bilayer MoS_{2} can be understood as the cooperation effects of the stacking-specific atomic reconstruction and the resonantly enhanced interlayer hybridization, which largely amplify the moiré superlattice effects on electronic correlations. Furthermore, extreme large nonlinear Hall responses up to room temperature are uncovered near correlated electronic states, demonstrating the quantum geometry of moiré flat conduction band.
There is increasing adoption of artificial intelligence in drug discovery. However, existing studies use machine learning to mainly utilize … (voir plus)the chemical structures of molecules but ignore the vast textual knowledge available in chemistry. Incorporating textual knowledge enables us to realize new drug design objectives, adapt to text-based instructions and predict complex biological activities. Here we present a multi-modal molecule structure–text model, MoleculeSTM, by jointly learning molecules’ chemical structures and textual descriptions via a contrastive learning strategy. To train MoleculeSTM, we construct a large multi-modal dataset, namely, PubChemSTM, with over 280,000 chemical structure–text pairs. To demonstrate the effectiveness and utility of MoleculeSTM, we design two challenging zero-shot tasks based on text instructions, including structure–text retrieval and molecule editing. MoleculeSTM has two main properties: open vocabulary and compositionality via natural language. In experiments, MoleculeSTM obtains the state-of-the-art generalization ability to novel biochemical concepts across various benchmarks. Machine learning methods in cheminformatics have made great progress in using chemical structures of molecules, but a large portion of textual information remains scarcely explored. Liu and colleagues trained MoleculeSTM, a foundation model that aligns the structure and text modalities through contrastive learning, and show its utility on the downstream tasks of structure–text retrieval, text-guided editing and molecular property prediction.
Human diseases are characterized by intricate cellular dynamics. Single-cell sequencing provides critical insights, yet a persistent gap rem… (voir plus)ains in computational tools for detailed disease progression analysis and targeted in-silico drug interventions. Here, we introduce UNAGI, a deep generative neural network tailored to analyze time-series single-cell transcriptomic data. This tool captures the complex cellular dynamics underlying disease progression, enhancing drug perturbation modeling and discovery. When applied to a dataset from patients with Idiopathic Pulmonary Fibrosis (IPF), UNAGI learns disease-informed cell embeddings that sharpen our understanding of disease progression, leading to the identification of potential therapeutic drug candidates. Validation via proteomics reveals the accuracy of UNAGI’s cellular dynamics analyses, and the use of the Fibrotic Cocktail treated human Precision-cut Lung Slices confirms UNAGI’s predictions that Nifedipine, an antihypertensive drug, may have antifibrotic effects on human tissues. UNAGI’s versatility extends to other diseases, including a COVID dataset, demonstrating adaptability and confirming its broader applicability in decoding complex cellular dynamics beyond IPF, amplifying its utility in the quest for therapeutic solutions across diverse pathological landscapes.
Network design problems constitute an important family of combinatorial optimization problems for which numerous exact and heuristic algorit… (voir plus)hms have been developed over the last few decades. Two central problems in this family are the multi-commodity, capacitated, fixed charge network design problem (MCFNDP) and its stochastic counterpart, the two-stage MCFNDP with recourse. These are standard problems that often serve as work benches for devising and testing models and algorithms in stylized but close-to-realistic settings. The purpose of this paper is to introduce two flexible, high-speed generators capable of simulating a wide range of settings for both the deterministic and stochastic MCFNDPs. We hope that, by facilitating systematic experimentation with new and larger sets of instances, these generators will lead to a more thorough assessment of the performance achieved by exact and heuristic solution methods in both deterministic and stochastic settings. We also hope that making these generators available will promote the reproducibility and comparability of published research.
Despite the recent advancements in speech recognition, there are still difficulties in accurately transcribing conversational and emotional … (voir plus)speech in noisy and reverberant acoustic environments. This poses a particular challenge in the search and rescue (SAR) domain, where transcribing conversations among rescue team members is crucial to support real-time decision-making. The scarcity of speech data and associated background noise in SAR scenarios make it difficult to deploy robust speech recognition systems. To address this issue, we have created and made publicly available a German speech dataset called RescueSpeech. This dataset includes real speech recordings from simulated rescue exercises. Additionally, we have released competitive training recipes and pre-trained models. Our study highlights that the performance attained by state-of-the-art methods in this challenging scenario is still far from reaching an acceptable level.
2023-12-15
2023 IEEE Automatic Speech Recognition and Understanding Workshop (ASRU) (publié)
Speech Emotion Recognition (SER) typically relies on utterance-level solutions. However, emotions conveyed through speech should be consider… (voir plus)ed as discrete speech events with definite temporal boundaries, rather than attributes of the entire utterance. To reflect the fine-grained nature of speech emotions, we propose a new task: Speech Emotion Diarization (SED). Just as Speaker Diarization answers the question of "Who speaks when?", Speech Emotion Diarization answers the question of "Which emotion appears when?". To facilitate the evaluation of the performance and establish a common benchmark for researchers, we introduce the Zaion Emotion Dataset (ZED), an openly accessible speech emotion dataset that includes non-acted emotions recorded in real-life conditions, along with manually-annotated boundaries of emotion segments within the utterance. We provide competitive baselines and open-source the code and the pre-trained models.
2023-12-15
2023 IEEE Automatic Speech Recognition and Understanding Workshop (ASRU) (publié)
TorchAudio is an open-source audio and speech processing library built for PyTorch. It aims to accelerate the research and development of au… (voir plus)dio and speech technologies by providing well-designed, easy-to-use, and performant PyTorch components. Its contributors routinely engage with users to understand their needs and fulfill them by developing impactful features. Here, we survey TorchAudio’s development principles and contents and highlight key features we include in its latest version (2.1): self-supervised learning pre-trained pipelines and training recipes, high-performance CTC decoders, speech recognition models and training recipes, advanced media I/O capabilities, and tools for performing forced alignment, multi-channel speech enhancement, and reference-less speech assessment. For a selection of these features, through empirical studies, we demonstrate their efficacy and show that they achieve competitive or state-of-the-art performance.
2023-12-15
2023 IEEE Automatic Speech Recognition and Understanding Workshop (ASRU) (publié)
Forests are vital to ecosystems, supporting biodiversity and essential services, but are rapidly changing due to land use and climate change… (voir plus). Understanding and mitigating negative effects requires parsing data on forests at global scale from a broad array of sensory modalities, and using them in diverse forest monitoring applications. Such diversity in data and applications can be effectively addressed through the development of a large, pre-trained foundation model that serves as a versatile base for various downstream tasks. However, remote sensing modalities, which are an excellent fit for several forest management tasks, are particularly challenging considering the variation in environmental conditions, object scales, image acquisition modes, spatio-temporal resolutions, etc. With that in mind, we present the first unified Forest Monitoring Benchmark (FoMo-Bench), carefully constructed to evaluate foundation models with such flexibility. FoMo-Bench consists of 15 diverse datasets encompassing satellite, aerial, and inventory data, covering a variety of geographical regions, and including multispectral, red-green-blue, synthetic aperture radar and LiDAR data with various temporal, spatial and spectral resolutions. FoMo-Bench includes multiple types of forest-monitoring tasks, spanning classification, segmentation, and object detection. To enhance task and geographic diversity in FoMo-Bench, we introduce TalloS, a global dataset combining satellite imagery with ground-based annotations for tree species classification across 1,000+ categories and hierarchical taxonomic levels. Finally, we propose FoMo-Net, a pre-training framework to develop foundation models with the capacity to process any combination of commonly used modalities and spectral bands in remote sensing.