Eugene Belilovsky

pietro.cagnasso@mila.quebec

Xiaolong Huang

Master's Research - Concordia University

Co-supervisor :

xiaolong.huang@mila.quebec

Paul Janson

PhD - Concordia University

Co-supervisor :

paul.janson@mila.quebec

Gwen Legate

PhD - Concordia University

Co-supervisor :

gwendolyne.legate@mila.quebec

Paria Mehrbod

Master's Research - Concordia University

Co-supervisor :

paria.mehrbod@mila.quebec

Abhinav Moudgil

PhD - Concordia University

abhinav.moudgil@mila.quebec

Adel Nabli

PhD - Concordia University

adel.nabli@mila.quebec

Geraldin Nanfack

Postdoctorate - Concordia University

Co-supervisor :

geraldin.nanfack@mila.quebec

tirathraj.ramburn@mila.quebec

Albert Orozco Camacho

PhD - Concordia University

Co-supervisor :

Master's Research - Université de Montréal

Ammar Sherif

PhD - Concordia University

Co-supervisor :

ammar.sherif@mila.quebec

Vaibhav Singh

PhD - Concordia University

Co-supervisor :

vaibhav.singh@mila.quebec

Benjamin Therien

PhD - Université de Montréal

Principal supervisor :

benjamin.therien@mila.quebec

Research Intern - Concordia University

junior-cedric.tonga@mila.quebec

Zhang Yanlei

Collaborating Alumni - Université de Montréal

Principal supervisor :

yanlei.zhang@mila.quebec

amirhossein.zamani@mila.quebec

Amirhossein Zamani

PhD - Concordia University

Co-supervisor :

Blake Richards

Publications

Guiding The Last Layer in Federated Learning with Pre-Trained Models

Lucas Caccia

Federated Learning (FL) is an emerging paradigm that allows a model to be trained across a number of participants without sharing data. Rece… (see more)nt works have begun to consider the effects of using pre-trained models as an initialization point for existing FL algorithms; however, these approaches ignore the vast body of efficient transfer learning literature from the centralized learning setting. Here we revisit the problem of FL from a pre-trained model considered in prior work and expand it to a set of computer vision transfer learning problems. We first observe that simply fitting a linear classification head can be efficient and effective in many cases. We then show that in the FL setting, fitting a classifier using the Nearest Class Means (NCM) can be done exactly and orders of magnitude more efficiently than existing proposals, while obtaining strong performance. Finally, we demonstrate that using a two-phase approach of obtaining the classifier and then fine-tuning the model can yield rapid convergence and improved generalization in the federated setting. We demonstrate the potential our method has to reduce communication and compute costs while achieving better model performance.

2023-12-11

Neural Information Processing Systems (Accept (poster))

Model Breadcrumbs: Scaling Multi-Task Model Merging with Sparse Masks

MohammadReza Davari

2023-12-10

ArXiv (preprint)

arxiv.org

Channel Selection for Test-Time Adaptation Under Distribution Shift

Muawiz Sajjad Chaudhary

An Tang

Guy Cloutier

Michael Eickenberg

To ensure robustness and generalization to real-world scenarios, test-time adaptation has been recently studied as an approach to adjust mod… (see more)els to a new data distribution during inference. Test-time batch normalization is a simple and popular method that achieved compelling performance on domain shift benchmarks by recalculating batch normalization statistics on test batches. However, in many practical applications this technique is vulnerable to label distribution shifts. We propose to tackle this challenge by only selectively adapting channels in a deep network, minimizing drastic adaptation that is sensitive to label shifts. We find that adapted models significantly improve the performance compared to the baseline models and counteract unknown label shifts.

2023-10-26

NeurIPS.cc/2023/Workshop/DistShift (poster)

Learning Optimizers for Local SGD

Charles-Etienne Joseph

2023-10-26

NeurIPS.cc/2023/Workshop/Federated_Learning (poster)

Gradient Masked Averaging for Federated Learning

Irene Tenison

Sai Aravind Sreeramadas

Vaikkunth Mugunthan

Edouard Oyallon

Federated learning (FL) is an emerging paradigm that permits a large number of clients with heterogeneous data to coordinate learning of a u… (see more)nified global model without the need to share data amongst each other. A major challenge in federated learning is the heterogeneity of data across client, which can degrade the performance of standard FL algorithms. Standard FL algorithms involve averaging of model parameters or gradient updates to approximate the global model at the server. However, we argue that in heterogeneous settings, averaging can result in information loss and lead to poor generalization due to the bias induced by dominant client gradients. We hypothesize that to generalize better across non-i.i.d datasets, the algorithms should focus on learning the invariant mechanism that is constant while ignoring spurious mechanisms that differ across clients. Inspired from recent works in Out-of-Distribution generalization, we propose a gradient masked averaging approach for FL as an alternative to the standard averaging of client updates. This aggregation technique for client updates can be adapted as a drop-in replacement in most existing federated algorithms. We perform extensive experiments on multiple FL algorithms with in-distribution, real-world, feature-skewed out-of-distribution, and quantity imbalanced datasets and show that it provides consistent improvements, particularly in the case of heterogeneous clients.

2023-10-23

Transactions on Machine Learning Research (accepted)

DragD3D: Vertex-based Editing for Realistic Mesh Deformations using 2D Diffusion Priors

Tianhao Xie

Sudhir Mudur

Tiberiu Popa

Direct mesh editing and deformation are key components in the geometric modeling and animation pipeline. Direct mesh editing methods are typ… (see more)ically framed as optimization problems combining user-specified vertex constraints with a regularizer that determines the position of the rest of the vertices. The choice of the regularizer is key to the realism and authenticity of the final result. Physics and geometry-based regularizers are not aware of the global context and semantics of the object, and the more recent deep learning priors are limited to a specific class of 3D object deformations. In this work, our main contribution is a local mesh editing method called DragD3D for global context-aware realistic deformation through direct manipulation of a few vertices. DragD3D is not restricted to any class of objects. It achieves this by combining the classic geometric ARAP (as rigid as possible) regularizer with 2D priors obtained from a large-scale diffusion model. Specifically, we render the objects from multiple viewpoints through a differentiable renderer and use the recently introduced DDS loss which scores the faithfulness of the rendered image to one from a diffusion model. DragD3D combines the approximate gradients of the DDS with gradients from the ARAP loss to modify the mesh vertices via neural Jacobian field, while also satisfying vertex constraints. We show that our deformations are realistic and aware of the global context of the objects, and provide better results than just using geometric regularizers.

2023-10-05

ArXiv (preprint)

arxiv.org

Comparison of Radiologists and Deep Learning for US Grading of Hepatic Steatosis

Sara‐Ivana Calce

Pamela Boustros

Cassandra Larocque-Rigney

Laurent Patry-Beaudoin

Yi Hui Luo

Emre Aslan

John Marinos

Talal Alamri

Kim‐Nhien Vu

Jessica Murphy-Lavallée

Jean-Sébastien Billiard

Emmanuel Montagnon

Hongliang Li

Samuel Kadoury

Bich Nguyen

Shanel Gauthier

Benjamin Therien

Eugene Belilovsky … (see 4 more)

Michael Chassé

Guy Cloutier

An Tang

Background Screening for nonalcoholic fatty liver disease (NAFLD) is suboptimal due to the subjective interpretation of US images. Purpose T… (see more)o evaluate the agreement and diagnostic performance of radiologists and a deep learning model in grading hepatic steatosis in NAFLD at US, with biopsy as the reference standard. Materials and Methods This retrospective study included patients with NAFLD and control patients without hepatic steatosis who underwent abdominal US and contemporaneous liver biopsy from September 2010 to October 2019. Six readers visually graded steatosis on US images twice, 2 weeks apart. Reader agreement was assessed with use of κ statistics. Three deep learning techniques applied to B-mode US images were used to classify dichotomized steatosis grades. Classification performance of human radiologists and the deep learning model for dichotomized steatosis grades (S0, S1, S2, and S3) was assessed with area under the receiver operating characteristic curve (AUC) on a separate test set. Results The study included 199 patients (mean age, 53 years ± 13 [SD]; 101 men). On the test set (n = 52), radiologists had fair interreader agreement (0.34 [95% CI: 0.31, 0.37]) for classifying steatosis grades S0 versus S1 or higher, while AUCs were between 0.49 and 0.84 for radiologists and 0.85 (95% CI: 0.83, 0.87) for the deep learning model. For S0 or S1 versus S2 or S3, radiologists had fair interreader agreement (0.30 [95% CI: 0.27, 0.33]), while AUCs were between 0.57 and 0.76 for radiologists and 0.73 (95% CI: 0.71, 0.75) for the deep learning model. For S2 or lower versus S3, radiologists had fair interreader agreement (0.37 [95% CI: 0.33, 0.40]), while AUCs were between 0.52 and 0.81 for radiologists and 0.67 (95% CI: 0.64, 0.69) for the deep learning model. Conclusion Deep learning approaches applied to B-mode US images provided comparable performance with human readers for detection and grading of hepatic steatosis. Published under a CC BY 4.0 license. Supplemental material is available for this article. See also the editorial by Tuthill in this issue.

2023-09-30

Radiology (unknown)

Automated liver segmentation and steatosis grading using deep learning on B-mode ultrasound images

Merve Kulbay

Pamela Boustros

Sara-Ivana Calce

Cassandra Larocque-Rigney

Laurent Patry-Beaudoin

Yi Hui Luo

Muawiz Chaudary

Samuel Kadoury

Bich Nguyen

Emmanuel Montagnon

Michael Chassé

An Tang

Guy Cloutier

Early detection of nonalcoholic fatty liver disease (NAFLD) is crucial to avoid further complications. Ultrasound is often used for screenin… (see more)g and monitoring of hepatic steatosis, however it is limited by the subjective interpretation of images. Computer assisted diagnosis could aid radiologists to achieve objective grading, and artificial intelligence approaches have been tested across various medical applications. In this study, we evaluated the performance of a two-stage hepatic steatosis detection deep learning framework, with a first step of liver segmentation and a subsequent step of hepatic steatosis classification. We evaluated the models on internal and external datasets, aiming to understand the generalizability of the framework. In the external dataset, our segmentation model achieved a Dice score of 0.92 (95% CI: 0.78, 1.00), and our classification model achieved an area under the receiver operating characteristic curve of 0.84 (95% CI: 0.79, 0.89). Our findings highlight the potential benefits of applying artificial intelligence models in NAFLD assessment.

2023-09-02

IUS (published)

Automated liver segmentation and steatosis grading using deep learning on B-mode ultrasound images

Merve Kulbay

Pamela Boustros

Sara‐Ivana Calce

Cassandra Larocque-Rigney

Laurent Patry-Beaudoin

Yi Hui Luo

M.A. Chaudary

Samuel Kadoury

Bich Nguyen

Emmanuel Montagnon

Michael Chassé

An Tang

Guy Cloutier

2023-09-02

IEEE International Ultrasonics Symposium (published)

Can Forward Gradient Match Backpropagation?

Louis Fournier

Stéphane Rivaud

Michael Eickenberg

Edouard Oyallon

Forward Gradients - the idea of using directional derivatives in forward differentiation mode - have recently been shown to be utilizable fo… (see more)r neural network training while avoiding problems generally associated with backpropagation gradient computation, such as locking and memorization requirements. The cost is the requirement to guess the step direction, which is hard in high dimensions. While current solutions rely on weighted averages over isotropic guess vector distributions, we propose to strongly bias our gradient guesses in directions that are much more promising, such as feedback obtained from small, local auxiliary networks. For a standard computer vision neural network, we conduct a rigorous study systematically covering a variety of combinations of gradient targets and gradient guesses, including those previously presented in the literature. We find that using gradients obtained from a local loss as a candidate direction drastically improves on random noise in Forward Gradient methods.

2023-07-24

International Conference on Machine Learning (Accept (Poster))

proceedings.mlr.press

Prototype-Sample Relation Distillation: Towards Replay-Free Continual Learning

Nader Asadi

MohammadReza Davari

Sudhir Mudur

Rahaf Aljundi

In Continual learning (CL) balancing effective adaptation while combating catastrophic forgetting is a central challenge. Many of the recent… (see more) best-performing methods utilize various forms of prior task data, e.g. a replay buffer, to tackle the catastrophic forgetting problem. Having access to previous task data can be restrictive in many real-world scenarios, for example when task data is sensitive or proprietary. To overcome the necessity of using previous tasks' data, in this work, we start with strong representation learning methods that have been shown to be less prone to forgetting. We propose a holistic approach to jointly learn the representation and class prototypes while maintaining the relevance of old class prototypes and their embedded similarities. Specifically, samples are mapped to an embedding space where the representations are learned using a supervised contrastive loss. Class prototypes are evolved continually in the same latent space, enabling learning and prediction at any point. To continually adapt the prototypes without keeping any prior task data, we propose a novel distillation loss that constrains class prototypes to maintain relative similarities as compared to new task data. This method yields state-of-the-art performance in the task-incremental setting, outperforming methods relying on large amounts of data, and provides strong performance in the class-incremental setting without using any stored data points.

2023-07-24

International Conference on Machine Learning (Accept (Poster))

proceedings.mlr.press

Continual Pre-Training of Large Language Models: How to (re)warm your model?

Quentin Gregory Anthony

Timothee LESORT

Large language models (LLMs) are routinely pre-trained on billions of tokens, only to restart the process over again once new data becomes a… (see more)vailable. A much cheaper and more efficient solution would be to enable the continual pre-training of these models, i.e. updating pre-trained models with new data instead of re-training them from scratch. However, the distribution shift induced by novel data typically results in degraded performance on past data. Taking a step towards efficient continual pre-training, in this work, we examine the effect of different warm-up strategies. Our hypothesis is that the learning rate must be re-increased to improve compute efficiency when training on a new dataset. We study the warmup phase of models pre-trained on the Pile (upstream data, 300B tokens) as we continue to pre-train on SlimPajama (downstream data, 297B tokens), following a linear warmup and cosine decay schedule. We conduct all experiments on the Pythia 410M language model architecture and evaluate performance through validation perplexity. We experiment with different pre-training checkpoints, various maximum learning rates, and various warmup lengths. Our results show that while rewarming models first increases the loss on upstream and downstream data, in the longer run it improves the downstream performance, outperforming models trained from scratch

2023-06-19

ES-FoMO @ International Conference on Machine Learning (poster)