Portrait of Doruk Cakmakci

Doruk Cakmakci

PhD - McGill University
Supervisor
Yue Li
Research Topics
Computational Biology
Deep Learning
Probabilistic Models
Website
Google Scholar
GitHub

Publications

Single-nucleus chromatin accessibility profiling identifies cell types and functional variants contributing to major depression.
Anjali Chawla
Doruk Cakmakci
Laura M. Fiori
Wenmin Zang
Malosree Maitra
Jennie Yang
Dariusz Żurawek
Gabriella Frosi
Reza Rahimian
Haruka Mitsuhashi
MA Davoli
Ryan Denniston
Gary Gang Chen
V. Yerko
Deborah Mash
Kiran Girdhar
S. Akbarian
Naguib Mechawar
Matthew Suderman
Yue Li … (see 2 more)
Corina Nagy
Gustavo Turecki
2025-08-05
Nature Genetics (published)
doi.org
Single-nucleus chromatin accessibility profiling identifies cell types and functional variants contributing to major depression
Anjali Chawla
Doruk Cakmakci
Laura M. Fiori
Wenmin Zang
Malosree Maitra
Jennie Yang
Dariusz Żurawek
Gabriella Frosi
Reza Rahimian
Haruka Mitsuhashi
Maria Antonietta Davoli
MA Davoli
Ryan Denniston
Gary Gang Chen
Volodymyr Yerko
Deborah Mash
Kiran Girdhar
Schahram Akbarian
Naguib Mechawar
Matthew Suderman … (see 3 more)
Yue Li
Corina Nagy
Gustavo Turecki
2025-08-05
Nature Genetics (published)
doi.org
Single-nucleus chromatin accessibility profiling identifies cell types and functional variants contributing to major depression
Anjali Chawla
Doruk Cakmakci
Laura M. Fiori
Wenmin Zang
Malosree Maitra
Jennie Yang
Dariusz Żurawek
Gabriella Frosi
Reza Rahimian
Haruka Mitsuhashi
Maria Antonietta Davoli
Ryan Denniston
Gary Gang Chen
Volodymyr Yerko
Deborah Mash
Kiran Girdhar
Schahram Akbarian
Naguib Mechawar
Matthew Suderman
Yue Li … (see 2 more)
Corina Nagy
Gustavo Turecki
2025-08-05
Nature Genetics (published)
doi.org
Differential Chromatin Architecture and Risk Variants in Deep Layer Excitatory Neurons and Grey Matter Microglia Contribute to Major Depressive Disorder
Anjali Chawla
Doruk Cakmakci
Wenmin Zhang
Malosree Maitra
Reza Rahimian
Haruka Mitsuhashi
MA Davoli
Jenny Yang
Gary Gang Chen
Ryan Denniston
Deborah Mash
Naguib Mechawar
Matthew Suderman
Yue Li
Corina Nagy
Gustavo Turecki
2023-10-03
bioRxiv (preprint)
doi.org