Publications

Fixing Bias in Reconstruction-based Anomaly Detection with Lipschitz Discriminators
Alexander Tong
Guy Wolf
Smita Krishnaswamy
Anomaly detection is of great interest in fields where abnormalities need to be identified and corrected (e.g., medicine and finance). Deep … (see more)learning methods for this task often rely on autoencoder reconstruction error, sometimes in conjunction with other penalties. We show that this approach exhibits intrinsic biases that lead to undesirable results. Reconstruction-based methods can sometimes show low error on simple-to-reconstruct points that are not part of the training data, for example the all black image. Instead, we introduce a new unsupervised Lipschitz anomaly discriminator (LAD) that does not suffer from these biases. Our anomaly discriminator is trained, similar to the discriminator of a GAN, to detect the difference between the training data and corruptions of the training data. We show that this procedure successfully detects unseen anomalies with guarantees on those that have a certain Wasserstein distance from the data or corrupted training set. These additions allow us to show improved performance on MNIST, CIFAR10, and health record data. Further, LAD does not require decoding back to the original data space, which makes anomaly detection possible in domains where it is difficult to define a decoder, such as in irregular graph structured data. Empirically, we show this framework leads to improved performance on image, health record, and graph data.
2019-05-26
Journal of Signal Processing Systems (published)
doi.org
Analysis and Detection of Information Types of Open Source Software Issue Discussions
Deeksha M. Arya
Wenting Wang
Jin Guo
Jinghui Cheng
Most modern Issue Tracking Systems (ITSs) for open source software (OSS) projects allow users to add comments to issues. Over time, these co… (see more)mments accumulate into discussion threads embedded with rich information about the software project, which can potentially satisfy the diverse needs of OSS stakeholders. However, discovering and retrieving relevant information from the discussion threads is a challenging task, especially when the discussions are lengthy and the number of issues in ITSs are vast. In this paper, we address this challenge by identifying the information types presented in OSS issue discussions. Through qualitative content analysis of 15 complex issue threads across three projects hosted on GitHub, we uncovered 16 information types and created a labeled corpus containing 4656 sentences. Our investigation of supervised, automated classification techniques indicated that, when prior knowledge about the issue is available, Random Forest can effectively detect most sentence types using conversational features such as the sentence length and its position. When classifying sentences from new issues, Logistic Regression can yield satisfactory performance using textual features for certain information types, while falling short on others. Our work represents a nontrivial first step towards tools and techniques for identifying and obtaining the rich information recorded in the ITSs to support various software engineering activities and to satisfy the diverse needs of OSS stakeholders.
2019-05-25
2019 IEEE/ACM 41st International Conference on Software Engineering (ICSE) (published)
doi.org
arxiv.org
Fairwashing: the risk of rationalization
Ulrich Aivodji
Hiromi Arai
Olivier Fortineau
Sébastien Gambs
Satoshi Hara
Alain Tapp
Black-box explanation is the problem of explaining how a machine learning model -- whose internal logic is hidden to the auditor and general… (see more)ly complex -- produces its outcomes. Current approaches for solving this problem include model explanation, outcome explanation as well as model inspection. While these techniques can be beneficial by providing interpretability, they can be used in a negative manner to perform fairwashing, which we define as promoting the false perception that a machine learning model respects some ethical values. In particular, we demonstrate that it is possible to systematically rationalize decisions taken by an unfair black-box model using the model explanation as well as the outcome explanation approaches with a given fairness metric. Our solution, LaundryML, is based on a regularized rule list enumeration algorithm whose objective is to search for fair rule lists approximating an unfair black-box model. We empirically evaluate our rationalization technique on black-box models trained on real-world datasets and show that one can obtain rule lists with high fidelity to the black-box model while being considerably less unfair at the same time.
2019-05-24
Proceedings of the 36th International Conference on Machine Learning (published)
proceedings.mlr.press
arxiv.org
N-BEATS: Neural basis expansion analysis for interpretable time series forecasting
Boris Oreshkin
Dmitri Carpov
Nicolas Chapados
Yoshua Bengio
We focus on solving the univariate times series point forecasting problem using deep learning. We propose a deep neural architecture based o… (see more)n backward and forward residual links and a very deep stack of fully-connected layers. The architecture has a number of desirable properties, being interpretable, applicable without modification to a wide array of target domains, and fast to train. We test the proposed architecture on several well-known datasets, including M3, M4 and TOURISM competition datasets containing time series from diverse domains. We demonstrate state-of-the-art performance for two configurations of N-BEATS for all the datasets, improving forecast accuracy by 11% over a statistical benchmark and by 3% over last year's winner of the M4 competition, a domain-adjusted hand-crafted hybrid between neural network and statistical time series models. The first configuration of our model does not employ any time-series-specific components and its performance on heterogeneous datasets strongly suggests that, contrarily to received wisdom, deep learning primitives such as residual blocks are by themselves sufficient to solve a wide range of forecasting problems. Finally, we demonstrate how the proposed architecture can be augmented to provide outputs that are interpretable without considerable loss in accuracy.
2019-05-24
ArXiv (preprint)
arxiv.org
arxiv.org
Prediction of Disease Progression in Multiple Sclerosis Patients using Deep Learning Analysis of MRI Data
Adrian Tousignant
Paul Lemaitre
Doina Precup
Douglas Arnold
Tal Arbel
We present the first automatic end-to-end deep learning framework for the prediction of future patient disability progression (one year from… (see more) baseline) based on multi-modal brain Magnetic Resonance Images (MRI) of patients with Multiple Sclerosis (MS). The model uses parallel convolutional pathways, an idea introduced by the popular Inception net (Szegedy et al., 2015) and is trained and tested on two large proprietary, multi-scanner, multi-center, clinical trial datasets of patients with Relapsing-Remitting Multiple Sclerosis (RRMS). Experiments on 465 patients on the placebo arms of the trials indicate that the model can accurately predict future disease progression, measured by a sustained increase in the extended disability status scale (EDSS) score over time. Using only the multi-modal MRI provided at baseline, the model achieves an AUC of 0.66±0.055. However, when supplemental lesion label masks are provided as inputs as well, the AUC increases to 0.701± 0.027. Furthermore, we demonstrate that uncertainty estimates based on Monte Carlo dropout sample variance correlate with errors made by the model. Clinicians provided with the predictions computed by the model can therefore use the associated uncertainty estimates to assess which scans require further examination.
2019-05-24
International Conference on Medical Imaging with Deep Learning (published)
proceedings.mlr.press
Stroke Lesion Segmentation in FLAIR MRI Datasets Using Customized Markov Random Fields
Nagesh K. Subbanna
Deepthi Rajashekar
Bastian Cheng
Götz Thomalla
Jens Fiehler
Tal Arbel
Nils D. Forkert
Robust and reliable stroke lesion segmentation is a crucial step toward employing lesion volume as an independent endpoint for randomized tr… (see more)ials. The aim of this work was to develop and evaluate a novel method to segment sub-acute ischemic stroke lesions from fluid-attenuated inversion recovery (FLAIR) magnetic resonance imaging (MRI) datasets. After preprocessing of the datasets, a Bayesian technique based on Gabor textures extracted from the FLAIR signal intensities is utilized to generate a first estimate of the lesion segmentation. Using this initial segmentation, a customized voxel-level Markov random field model based on intensity as well as Gabor texture features is employed to refine the stroke lesion segmentation. The proposed method was developed and evaluated based on 151 multi-center datasets from three different databases using a leave-one-patient-out validation approach. The comparison of the automatically segmented stroke lesions with manual ground truth segmentation revealed an average Dice coefficient of 0.582, which is in the upper range of previously presented lesion segmentation methods using multi-modal MRI datasets. Furthermore, the results obtained by the proposed technique are superior compared to the results obtained by two methods based on convolutional neural networks and three phase level-sets, respectively, which performed best in the ISLES 2015 challenge using multi-modal imaging datasets. The results of the quantitative evaluation suggest that the proposed method leads to robust lesion segmentation results using FLAIR MRI datasets only as a follow-up sequence.
2019-05-24
Frontiers in Neurology (published)
doi.org
The Value Function Polytope in Reinforcement Learning
Robert Dadashi
Adrien Ali Taiga
Nicolas Le Roux
Dale Schuurmans
Marc Gendron-Bellemare
We establish geometric and topological properties of the space of value functions in finite state-action Markov decision processes. Our main… (see more) contribution is the characterization of the nature of its shape: a general polytope (Aigner et al., 2010). To demonstrate this result, we exhibit several properties of the structural relationship between policies and value functions including the line theorem, which shows that the value functions of policies constrained on all but one state describe a line segment. Finally, we use this novel perspective to introduce visualizations to enhance the understanding of the dynamics of reinforcement learning algorithms.
2019-05-24
Proceedings of the 36th International Conference on Machine Learning (published)
proceedings.mlr.press
arxiv.org
Understanding the impact of entropy on policy optimization
Zafarali Ahmed
Nicolas Le Roux
Mohammad Norouzi
Dale Schuurmans
Entropy regularization is commonly used to improve policy optimization in reinforcement learning. It is believed to help with \emph{explorat… (see more)ion} by encouraging the selection of more stochastic policies. In this work, we analyze this claim using new visualizations of the optimization landscape based on randomly perturbing the loss function. We first show that even with access to the exact gradient, policy optimization is difficult due to the geometry of the objective function. Then, we qualitatively show that in some environments, a policy with higher entropy can make the optimization landscape smoother, thereby connecting local optima and enabling the use of larger learning rates. This paper presents new tools for understanding the optimization landscape, shows that policy entropy serves as a regularizer, and highlights the challenge of designing general-purpose policy optimization algorithms.
2019-05-24
Proceedings of the 36th International Conference on Machine Learning (published)
proceedings.mlr.press
arxiv.org
Usability of Virtual Reality Application Through the Lens of the User Community: A Case Study
Wenting Wang
Jinghui Cheng
Jin Guo
The increasing availability and diversity of virtual reality (VR) applications highlighted the importance of their usability. Function-orien… (see more)ted VR applications posed new challenges that are not well studied in the literature. Moreover, user feedback becomes readily available thanks to modern software engineering tools, such as app stores and open source platforms. Using Firefox Reality as a case study, we explored the major types of VR usability issues raised in these platforms. We found that 77% of usability feedbacks can be mapped to Nielsen's heuristics while few were mappable to VR-specific heuristics. This result indicates that Nielsen's heuristics could potentially help developers address the usability of this VR application in its early development stage. This work paves the road for exploring tools leveraging the community effort to promote the usability of function-oriented VR applications.
2019-05-02
Extended Abstracts of the 2019 CHI Conference on Human Factors in Computing Systems (published)
doi.org
arxiv.org
Continual Learning with Self-Organizing Maps
Pouya Bashivan
Martin Schrimpf
Robert Ajemian
Irina Rish
Matthew D Riemer
Yuhai Tu
Despite remarkable successes achieved by modern neural networks in a wide range of applications, these networks perform best in domain-speci… (see more)fic stationary environments where they are trained only once on large-scale controlled data repositories. When exposed to non-stationary learning environments, current neural networks tend to forget what they had previously learned, a phenomena known as catastrophic forgetting. Most previous approaches to this problem rely on memory replay buffers which store samples from previously learned tasks, and use them to regularize the learning on new ones. This approach suffers from the important disadvantage of not scaling well to real-life problems in which the memory requirements become enormous. We propose a memoryless method that combines standard supervised neural networks with self-organizing maps to solve the continual learning problem. The role of the self-organizing map is to adaptively cluster the inputs into appropriate task contexts - without explicit labels - and allocate network resources accordingly. Thus, it selectively routes the inputs in accord with previous experience, ensuring that past learning is maintained and does not interfere with current learning. Out method is intuitive, memoryless, and performs on par with current state-of-the-art approaches on standard benchmarks.
2019-04-19
ArXiv (preprint)
arxiv.org
arxiv.org
Connecting Weighted Automata and Recurrent Neural Networks through Spectral Learning
Guillaume Rabusseau
Tianyu Li
Doina Precup
In this paper, we unravel a fundamental connection between weighted finite automata~(WFAs) and second-order recurrent neural networks~(2-RNN… (see more)s): in the case of sequences of discrete symbols, WFAs and 2-RNNs with linear activation functions are expressively equivalent. Motivated by this result, we build upon a recent extension of the spectral learning algorithm to vector-valued WFAs and propose the first provable learning algorithm for linear 2-RNNs defined over sequences of continuous input vectors. This algorithm relies on estimating low rank sub-blocks of the so-called Hankel tensor, from which the parameters of a linear 2-RNN can be provably recovered. The performances of the proposed method are assessed in a simulation study.
2019-04-11
Proceedings of the Twenty-Second International Conference on Artificial Intelligence and Statistics (published)
proceedings.mlr.press
arxiv.org
Distributional reinforcement learning with linear function approximation
Marc Gendron-Bellemare
Nicolas Le Roux
Pablo Samuel Castro
Subhodeep Moitra
Despite many algorithmic advances, our theoretical understanding of practical distributional reinforcement learning methods remains limited.… (see more) One exception is Rowland et al. (2018)'s analysis of the C51 algorithm in terms of the Cramer distance, but their results only apply to the tabular setting and ignore C51's use of a softmax to produce normalized distributions. In this paper we adapt the Cramer distance to deal with arbitrary vectors. From it we derive a new distributional algorithm which is fully Cramer-based and can be combined to linear function approximation, with formal guarantees in the context of policy evaluation. In allowing the model's prediction to be any real vector, we lose the probabilistic interpretation behind the method, but otherwise maintain the appealing properties of distributional approaches. To the best of our knowledge, ours is the first proof of convergence of a distributional algorithm combined with function approximation. Perhaps surprisingly, our results provide evidence that Cramer-based distributional methods may perform worse than directly approximating the value function.
2019-04-11
Proceedings of the Twenty-Second International Conference on Artificial Intelligence and Statistics (published)
proceedings.mlr.press
arxiv.org