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Publications
Medical Imaging with Deep Learning: MIDL 2020 - Short Paper Track
This compendium gathers all the accepted extended abstracts from the Third International Conference on Medical Imaging with Deep Learning (M… (see more)IDL 2020), held in Montreal, Canada, 6-9 July 2020. Note that only accepted extended abstracts are listed here, the Proceedings of the MIDL 2020 Full Paper Track are published in the Proceedings of Machine Learning Research (PMLR).
Domain adaptation (DA) is a technique that transfers predictive models trained on a labeled source domain to an unlabeled target domain, wit… (see more)h the core difficulty of resolving distributional shift between domains. Currently, most popular DA algorithms are based on distributional matching (DM). However in practice, realistic domain shifts (RDS) may violate their basic assumptions and as a result these methods will fail. In this paper, in order to devise robust DA algorithms, we first systematically analyze the limitations of DM based methods, and then build new benchmarks with more realistic domain shifts to evaluate the well-accepted DM methods. We further propose InstaPBM, a novel Instance-based Predictive Behavior Matching method for robust DA. Extensive experiments on both conventional and RDS benchmarks demonstrate both the limitations of DM methods and the efficacy of InstaPBM: Compared with the best baselines, InstaPBM improves the classification accuracy respectively by
Deep Neural Networks (DNNs) in general and Convolutional Neural Networks (CNNs) in particular are state-of-the-art in numerous computer visi… (see more)on tasks such as object classification and detection. However, the large amount of parameters they contain leads to a high computational complexity and strongly limits their usability in budget-constrained devices such as embedded devices. In this paper, we propose a combination of a pruning technique and a quantization scheme that effectively reduce the complexity and memory usage of convolutional layers of CNNs, by replacing the complex convolutional operation by a low-cost multiplexer. We perform experiments on CIFAR10, CIFAR100 and SVHN datasets and show that the proposed method achieves almost state-of-the-art accuracy, while drastically reducing the computational and memory footprints compared to the baselines. We also propose an efficient hardware architecture, implemented on Field Programmable Gate Arrays (FPGAs), to accelerate inference, which works as a pipeline and accommodates multiple layers working at the same time to speed up the inference process. In contrast with most proposed approaches which have used external memory or software defined memory controllers, our work is based on algorithmic optimization and full-hardware design, enabling a direct, on-chip memory implementation of a DNN while keeping close to state of the art accuracy.
2020-06-16
2020 18th IEEE International New Circuits and Systems Conference (NEWCAS) (published)
Attention and self-attention mechanisms, inspired by cognitive processes, are now central to state-of-the-art deep learning on sequential ta… (see more)sks. However, most recent progress hinges on heuristic approaches with limited understanding of attention's role in model optimization and computation, and rely on considerable memory and computational resources that scale poorly. In this work, we present a formal analysis of how self-attention affects gradient propagation in recurrent networks, and prove that it mitigates the problem of vanishing gradients when trying to capture long-term dependencies. Building on these results, we propose a relevancy screening mechanism, inspired by the cognitive process of memory consolidation, that allows for a scalable use of sparse self-attention with recurrence. While providing guarantees to avoid vanishing gradients, we use simple numerical experiments to demonstrate the tradeoffs in performance and computational resources by efficiently balancing attention and recurrence. Based on our results, we propose a concrete direction of research to improve scalability of attentive networks.
Multimorbidity increases care needs among people with chronic diseases. In order to support communication between patients, their informal c… (see more)aregivers and their healthcare teams, we developed CONCERTO+, a patient portal for chronic disease management in primary care. A user-centered design comprising 3 iterations with patients and informal caregivers was performed. Clinicians were also invited to provide feedback on the feasibility of the solution. Several improvements were brought to CONCERTO+, and it is now ready to be implemented in real-life setting.
