Portrait of Mohamed Mohamed

Mohamed Mohamed

Master's Research - McGill University
Supervisor
Tal Arbel
Research Topics
Computer Vision
GitHub

Publications

Imagining Alternatives: Towards High-Resolution 3D Counterfactual Medical Image Generation via Language Guidance
Mohamed Mohamed
Brennan Nichyporuk
Douglas Arnold
Tal Arbel
Vision-language models have demonstrated impressive capabilities in generating 2D images under various conditions; however, the success of t… (see more)hese models is largely enabled by extensive, readily available pretrained foundation models. Critically, comparable pretrained models do not exist for 3D, significantly limiting progress. As a result, the potential of vision-language models to produce high-resolution 3D counterfactual medical images conditioned solely on natural language remains unexplored. Addressing this gap would enable powerful clinical and research applications, such as personalized counterfactual explanations, simulation of disease progression, and enhanced medical training by visualizing hypothetical conditions in realistic detail. Our work takes a step toward this challenge by introducing a framework capable of generating high-resolution 3D counterfactual medical images of synthesized patients guided by free-form language prompts. We adapt state-of-the-art 3D diffusion models with enhancements from Simple Diffusion and incorporate augmented conditioning to improve text alignment and image quality. To our knowledge, this is the first demonstration of a language-guided native-3D diffusion model applied to neurological imaging, where faithful three-dimensional modeling is essential. On two neurological MRI datasets, our framework simulates varying counterfactual lesion loads in Multiple Sclerosis and cognitive states in Alzheimer's disease, generating high-quality images while preserving subject fidelity. Our results lay the groundwork for prompt-driven disease progression analysis in 3D medical imaging. Project link - https://lesupermomo.github.io/imagining-alternatives/.
2025-09-07
ArXiv (preprint)
arxiv.org
arxiv.org
Imagining Alternatives: Towards High-Resolution 3D Counterfactual Medical Image Generation via Language Guidance
Mohamed Mohamed
Brennan Nichyporuk
Douglas Arnold
Tal Arbel
Vision-language models have demonstrated impressive capabilities in generating 2D images under various conditions; however the impressive pe… (see more)rformance of these models in 2D is largely enabled by extensive, readily available pretrained foundation models. Critically, comparable pretrained foundation models do not exist for 3D, significantly limiting progress in this domain. As a result, the potential of vision-language models to produce high-resolution 3D counterfactual medical images conditioned solely on natural language descriptions remains completely unexplored. Addressing this gap would enable powerful clinical and research applications, such as personalized counterfactual explanations, simulation of disease progression scenarios, and enhanced medical training by visualizing hypothetical medical conditions in realistic detail. Our work takes a meaningful step toward addressing this challenge by introducing a framework capable of generating high-resolution 3D counterfactual medical images of synthesized patients guided by free-form language prompts. We adapt state-of-the-art 3D diffusion models with enhancements from Simple Diffusion and incorporate augmented conditioning to improve text alignment and image quality. To our knowledge, this represents the first demonstration of a language-guided native-3D diffusion model applied specifically to neurological imaging data, where faithful three-dimensional modeling is essential to represent the brain's three-dimensional structure. Through results on two distinct neurological MRI datasets, our framework successfully simulates varying counterfactual lesion loads in Multiple Sclerosis (MS), and cognitive states in Alzheimer's disease, generating high-quality images while preserving subject fidelity in synthetically generated medical images. Our results lay the groundwork for prompt-driven disease progression analysis within 3D medical imaging.
2025-09-07
ArXiv (preprint)
arxiv.org
arxiv.org